Month: December 2024

New publication from herbarium

Simon A., D. Parker, J.A. Chimal Ballesteros, J. Orlando & B. Goffinet. 2024. The identity of the North American endemic Dendriscocaulon intricatulum and two southern South American cyanomorphs in the Peltigerales. The Bryologist 127: 441–464. pdf
Abstract reads: Lichen photomorphs refer to distinct symbiotic structures formed by conspecific fungi associated with different photosynthetic partners, either a green alga or a cyanobacterium. Thus, a single fungal species can engage in symbiotic relationships with different photobionts, resulting in independent, often morphologically distinct, lichen thalli. Historically, the morphological dissimilarity between photomorphs has often led to their classification as separate fungal species, which could even have been accommodated in different genera. However, molecular data have played a crucial role in revealing the genetic similarity and conspecific nature of the fungi composing these photomorphs. In this study, we employed a phylogenetic framework to validate the conspecificity of photomorph pairs within three species indigenous to the Americas: Nephroma kuehnemanni, Ricasolia quercizans and Sticta ainoae. Consequently, Nephroma microphyllum is considered a synonym of N. kuehnemanni, Dendriscocaulon intricatulum a synonym of R. quercizans, and freeliving Chilean dendriscocauloid lichens are shown to be cyanomorphs of S. ainoae. A species distribution modeling approach to investigate the geographical distribution and niche characteristics of photomorphs within R. quercizans in eastern North America revealed that its two photomorphs exhibit distinct distributions and ecological niches, suggesting potential adaptations to different environmental conditions. The confirmed conspecificity and niche variation among the considered photomorphs provide insights into the ecological and evolutionary dynamics of these intricate symbiotic associations.

New publication: new species of Cicadas

Lee, Y.J. & Z. Lei. 2024. A new cicada species of the genus Kosemia Matsumura (Hemiptera: Cicadidae: Cicadettinae) from Xinjiang, China. Journal of Insect Biodiversity 57(1): 13–18. pdf

Abstract reads: Kosemia brevis sp. nov. (Hemiptera: Cicadidae: Cicadettinae: Cicadettini) is described from Xinjiang, China. This species is morphologically closest to Kosemia yezoensis (Matsumura, 1898) as its forewing median vein and cubitus anterior vein are fused at the base. However, the new species can be distinguished from K. yezoensis by the size and color of the anal styles. Its body is much smaller but plump, and its forewing is comparatively short, compared to K. yezoensis.

New publication with herbarium voucher

Vuruputoor V.S., A. Starovoitov, Y. Cai, Y. Liu, N. Rahmatpour, T. Hedderson, N. Wilding, J.L. Wegrzyn & B. Goffinet. 2024. Crossroads of assembling a moss genome: navigating contaminants and horizontal gene transfer in the moss Physcomitrellopsis africana. G3: Genes, Genomes, Genetics 14(7): jkae104. pdf

Abstract reads: The first chromosome-scale reference genome of the rare narrow-endemic African moss Physcomitrellopsis africana (P. africana) is presented here. Assembled from 73 × Oxford Nanopore Technologies (ONT) long reads and 163 × Beijing Genomics Institute (BGI)-seq short reads, the 414 Mb reference comprises 26 chromosomes and 22,925 protein-coding genes [Benchmarking Universal Single-Copy Ortholog (BUSCO) scores: C:94.8% (D:13.9%)]. This genome holds 2 genes that withstood rigorous filtration of microbial contaminants, have no homolog in other land plants, and are thus interpreted as resulting from 2 unique horizontal gene transfers (HGTs) from microbes. Further, P. africana shares 176 of the 273 published HGT candidates identified in Physcomitrium patens (P. patens), but lacks 98 of these, highlighting that perhaps as many as 91 genes were acquired in P. patens in the last 40 million years following its divergence from its common ancestor with P. africana. These observations suggest rather continuous gene gains via HGT followed by potential losses during the diversification of the Funariaceae. Our findings showcase both dynamic flux in plant HGTs over evolutionarily “short” timescales, alongside enduring impacts of successful integrations, like those still functionally maintained in extant P. africana. Furthermore, this study describes the informatic processes employed to distinguish contaminants from candidate HGT events.

New publication from the bird collection

Muzio, F. M., & Rubega, M. A. 2024. What do we really know about the water repellency of feathers?. Journal of Avian Biology, 2024(11-12), e03259. pdf

Abstract reads: Feathers are complex integument structures that provide birds with many functions. They are vital to a bird’s survival, fundamental to their visual displays, and responsible for the evolutionary radiation of the avian class. Feathers provide a protective barrier for the body; their water repellency is a key feature. Despite hundreds of years of ornithological research, the available literature on how feathers repel water is both limited and puzzling. Most hypotheses from the early 1900s suggested uropygial gland oil provided feathers with a hydrophobic coating. Subsequent studies showed that the feather’s hierarchical structure creates a porous substrate that readily repels water with or without oil. Numerous studies and methods have been published attempting to explain, quantify, and compare the water repellency of feathers. Many overlook the role of barbules and the effect of their variation, which both likely play a crucial part in water repellency. The goal of this paper is to synthesize this research to better understand what has been done, what makes sense, and more importantly, what is missing. Previous reviews on this subject are mostly over 30 years old and did not use modern methods for systematic review. Here, we performed a systematic review to capture all relevant published papers on feather water repellency. We emphasize the crucial role of barbules in feather water repellency and why their morphological variation should not be ignored. We answer the question, what do we really know about the water repellency of feathers?